Limnol Oceanogr Meth 2007, 5:353–362 CrossRef 26 Mortazavi A, Wi

Limnol Oceanogr Meth 2007, 5:353–362.CrossRef 26. Mortazavi A, Williams BA, McCue K, Schaeffer L, Wold B: Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat

Methods 2008, 5:621–628.PubMedCrossRef 27. Taboada B, Ciria R, Martinez-Guerrero CE, Merino E: ProOpDB: prokaryotic PHA-848125 mw operon DataBase. Nucleic Acids Res 2012, 40:PLX3397 D627-D631.PubMedCentralPubMedCrossRef 28. Steglich C, Futschik ME, Lindell D, Voss B, Chisholm SW, Hess WR: The challenge of regulation in a minimal photoautotroph: Non-coding RNAs in Prochlorococcus . PLoS Genet 2008,4(8):e1000173.PubMedCentralPubMedCrossRef 29. Steglich C, Lindell D, Futschik M, Rector T, Steen R, Chisholm SW: Short RNA half-lives in the slow-growing marine cyanobacterium Prochlorococcus . Genome Biol 2010, 11:R54.PubMedCentralPubMedCrossRef Selleckchem OICR-9429 30. Holtzendorff J, Partensky F, Mella D, Lennon J-F, Hess WR, Garczarek L: Genome streamlining results in loss of robustness of the circadian clock in the marine cyanobacterium Prochlorococcus marinus PCC 9511. J Biol Rhythms 2008, 23:187–199.PubMedCrossRef 31. Mary I, Vaulot D: Two-component systems in Prochlorococcus MED4: Genomic analysis and differential expression under stress. FEMS

Microbiol Lett 2003, 226:135–144.PubMedCrossRef 32. Memon D, Singh AK, Pakrasi HB, Wangikar PP: A global analysis of adaptive evolution of operons in cyanobacteria. Antonie Van Leeuwenhoek 2013,103(2):331–346.PubMedCrossRef 33. Klein MG, Zwart P, Bagby SC, Cai F, Chisholm SW, Heinhorst S, Cannon GC, Kerfeld CA: Identification and structural analysis of a novel carboxysome shell protein with implications for metabolite transport. J Mol Biol 2009, 392:319–333.PubMedCrossRef 34. Sorek R, Cossart P: Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicity. Nat Rev Genet Cell Penetrating Peptide 2010, 11:9–16.PubMedCrossRef

35. Gardner PP, Daub J, Tate JG, Nawrocki EP, Kolbe DL, Lindgreen S, Wilkinson AC, Finn RD, Griffiths-Jones S, Eddy SR, Bateman A: Rfam: updates to the RNA families database. Nucleic Acids Res 2009, 37:D136-D140.PubMedCentralPubMedCrossRef 36. Tagwerker C, Dupont CL, Karas BJ, Ma L, Chuang RY, Benders GA, Ramon A, Novotny M, Montague MG, Venepally P, et al.: Sequence analysis of a complete 1.66 Mb Prochlorococcus marinus MED4 genome cloned in yeast. Nucleic Acids Res 2012,40(20):10375–10383.PubMedCentralPubMedCrossRef 37. Naville M, Ghuillot-Gaudeffroy A, Marchais A, Gautheret D: ARNold: a web tool for the prediction of Rho-independent transcription terminators. RNA Biol 2011, 8:11–13.PubMedCrossRef 38. Waldbauer JR, Rodrigue S, Coleman ML, Chisholm SW: Transcriptome and proteome dynamics of a light–dark synchronized bacterial cell cycle. PLoS One 2012, 7:e43432.PubMedCentralPubMedCrossRef 39. Zhang R, Lin Y: DEG 5.0, a database of essential genes in both prokaryotes and eukaryotes.

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