Taking into account the presence of the GST and His6 tags in the fusion protein, which correspond to ~ 30 kDa, the molecular mass of

our purified Pc Aad1p is in accordance with the theoretical buy SU5402 molecular mass calculated from its amino acid composition (43 kDa) and very close to the apparent 47 kDa of the Aad enzyme purified from P. chrysosporium by Muheim et al.[19]. Figure 2 Purification of the recombinant Pc Aad1p after expression in E. coli. The Pc Aad1p fused to GST and His6 tags was expressed in E. coli BL21 Star™(DE3) strain with the pGS-21a expression vector under the control of the strong T7 promoter. Proteins were separated by SDS-PAGE and visualized by Coomassie Blue staining. Lane 1: Cell lysate of E. coli IPTG-induced cells; Lane 2: Protein molecular size markers; Lane 3: Recombinant Pc Aad1p after purification by Glutathione-affinity chromatography. Biochemical characterization of the purified recombinant Pc Aad1p Structure analysis of Pc Aad1p We searched for functional

domains of the Pc Aad1 protein using the Pfam database server [25, 26]. This in silico analysis identified the protein as belonging Quisinostat supplier to subfamily AKR9A of the aldo-keto reductase (AKR) superfamily with residues D71, Y76 and K103 as predicted active- sites. The AKR superfamily is one of the three enzyme superfamilies that perform oxidoreduction on a wide variety of natural and foreign substrates [27]. The large AKR superfamily includes presently 15 families, with more than 170 proteins identified in mammals, plants, fungi and bacteria. AKR structures share a highly conserved (α/β)8-barrel motif, a conserved cofactor (mostly NADPH) binding site and catalytic

tetrad, and a variable loop structure which usually defines broad substrate specificity. The majority of AKRs are monomeric proteins of about 320 amino acids in length, although several members from families AKR2, AKR6 and AKR7 were found to form multimers [28]. The closest AKR protein ‘relatives’ of Pc Aad1p (AKR9A3) are the fungal norsolorinic acid reductase from Aspergillus flavus (AKR9A2) and sterogmatocystin dehydrogenase from Aspergillus nidulans (AKR9A1) and the putative yeast proteins Aad14p, Aad3p, Aad4p and Aad10p from Saccharomyces cerevisiae. According to the family tree structure, the Farnesyltransferase nearest AKR with 3D structure characterized is AKR11C1 from the bacterium Bacillus halodurans[27, 29]. Aldo-keto reductases catalyze oxidation and reduction reactions on a range of substrates using NAD(P)(H) as cofactor. An ordered Bi Bi kinetic www.selleckchem.com/products/INCB18424.html mechanism, in which cofactor binds first and leaves last, has been demonstrated for pig kidney aldehyde reductase (ALR) [30], bovine kidney aldose reductase ADR [31], rat liver 3-alpha-hydroxysteroid dehydrogenase (3α-HSD) [32] and 3-oxo-5b-steroid 4-dehydrogenase [33], and may be a characteristic feature of other AKRs [34].